schicluster.impute.impute_chromosome

Module Contents

calc_sparsity(matrix)

random_walk_cpu(P, rp, tol)

impute_chromosome(chrom, resolution, output_path, scool_url=None, contact_path=None, chrom_size_path=None, logscale=False, pad=1, std=1, rp=0.5, tol=0.01, window_size=500000000, step_size=10000000, output_dist=500000000, min_cutoff=0, chrom1=1, pos1=2, chrom2=5, pos2=6)