Skip to main content

Ctrl+K

scHiCluster

scHiCluster

Tutorial

Tan et al. Cell 2021.
Human Brain Atlas

COMMAND LINE TOOLS

hicluster filter-contact
hicluster prepare-impute
hicluster contact-distance
hicluster embedding
hicluster cpg-ratio
hicluster compartment
hicluster domain
hicluster gene-score
hicluster merge-cell-raw
hicluster merge-cool

Repository
Open issue

.md

Differential compartments

Differential compartments#

Differential compartments between major types, and correlation with mC, ATAC, and RNA

previous

Plot correlation between boundary and mC/ATAC/RNA

next

Call compartment

By Jingtian Zhou

© Copyright 2023.