schicluster.loop.shuffle_fdr

Module Contents

_t_score(T, T2, tot)

compute_t(group_prefix, tot=None)

permute_fdr(chrom_size_path, black_list_path, shuffle_group_prefix, real_group_prefix, res=10000, pad=7, min_dist=5, max_dist=500)

update_fdr_qval(chrom_size_path, real_group_prefix, shuffle_group_prefix, res=10000, min_dist=5, max_dist=500)